Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 R3HDM2P2-201ENST00000401880 2116 ntBASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC23.92■■□□□ 1.42
SCAF1Q9H7N4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 KRT223P-202ENST00000449164 1292 ntBASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 KATNBL1P4-201ENST00000503545 918 ntBASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 MTND1P8-201ENST00000571424 950 ntBASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 AL512343.1-201ENST00000605837 169 ntBASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCAF1Q9H7N4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 MAPK10-379ENST00000642013 1385 ntBASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 AC133552.6-201ENST00000613406 534 ntBASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 AL645728.2-201ENST00000641974 660 ntBASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 AC092964.1-201ENST00000623304 1399 ntBASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC23.9■■□□□ 1.42
SCAF1Q9H7N4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 AC114322.1-201ENST00000506771 926 ntBASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 AC009039.2-201ENST00000624524 529 ntBASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC23.89■■□□□ 1.42
SCAF1Q9H7N4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms