Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC20.53■□□□□ 0.88
ABCA3Q99758 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
ABCA3Q99758 AC007881.3-201ENST00000608897 607 ntBASIC20.53■□□□□ 0.88
ABCA3Q99758 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCA3Q99758 AL162426.1-201ENST00000624141 743 ntBASIC20.53■□□□□ 0.88
ABCA3Q99758 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCA3Q99758 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCA3Q99758 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCA3Q99758 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCA3Q99758 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ABCA3Q99758 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.52■□□□□ 0.88
ABCA3Q99758 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
ABCA3Q99758 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ABCA3Q99758 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.52■□□□□ 0.88
ABCA3Q99758 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.52■□□□□ 0.88
ABCA3Q99758 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCA3Q99758 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ABCA3Q99758 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ABCA3Q99758 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ABCA3Q99758 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ABCA3Q99758 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCA3Q99758 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCA3Q99758 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCA3Q99758 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ABCA3Q99758 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCA3Q99758 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.51■□□□□ 0.87
ABCA3Q99758 AC051619.9-201ENST00000623237 597 ntBASIC20.51■□□□□ 0.87
ABCA3Q99758 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCA3Q99758 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCA3Q99758 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ABCA3Q99758 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCA3Q99758 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 AP000593.2-201ENST00000542775 1433 ntBASIC20.51■□□□□ 0.87
ABCA3Q99758 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCA3Q99758 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCA3Q99758 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.5■□□□□ 0.87
ABCA3Q99758 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 AC010141.1-201ENST00000411585 623 ntBASIC20.5■□□□□ 0.87
ABCA3Q99758 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC20.5■□□□□ 0.87
ABCA3Q99758 HLA-J-204ENST00000495278 958 ntBASIC20.5■□□□□ 0.87
ABCA3Q99758 RPL17P45-201ENST00000586289 509 ntBASIC20.5■□□□□ 0.87
ABCA3Q99758 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC20.5■□□□□ 0.87
ABCA3Q99758 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 AC006453.1-201ENST00000636037 1257 ntBASIC20.5■□□□□ 0.87
ABCA3Q99758 AL805961.1-201ENST00000642026 753 ntBASIC20.5■□□□□ 0.87
ABCA3Q99758 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCA3Q99758 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ABCA3Q99758 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCA3Q99758 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCA3Q99758 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 NDUFS6P1-201ENST00000485187 316 ntBASIC20.5■□□□□ 0.87
ABCA3Q99758 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ABCA3Q99758 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC20.5■□□□□ 0.87
ABCA3Q99758 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCA3Q99758 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCA3Q99758 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
ABCA3Q99758 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms