Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 NORAD-201ENST00000565493 5339 ntBASIC15.99■□□□□ 0.15
NDNQ99608 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 AC013268.4-201ENST00000637413 2228 ntBASIC15.99■□□□□ 0.15
NDNQ99608 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 AP001282.1-201ENST00000531301 1499 ntBASIC15.99■□□□□ 0.15
NDNQ99608 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 AC018892.3-201ENST00000623986 2499 ntBASIC15.99■□□□□ 0.15
NDNQ99608 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 AC079140.1-201ENST00000508039 487 ntBASIC15.99■□□□□ 0.15
NDNQ99608 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.99■□□□□ 0.15
NDNQ99608 RNA5SP410-201ENST00000516285 106 ntBASIC15.99■□□□□ 0.15
NDNQ99608 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 FAM86C2P-203ENST00000528684 1004 ntBASIC15.99■□□□□ 0.15
NDNQ99608 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 AC026120.1-201ENST00000611536 926 ntBASIC15.99■□□□□ 0.15
NDNQ99608 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.99■□□□□ 0.15
NDNQ99608 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.99■□□□□ 0.15
NDNQ99608 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDNQ99608 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.99■□□□□ 0.15
NDNQ99608 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.98■□□□□ 0.15
NDNQ99608 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 AC004832.2-201ENST00000426397 482 ntBASIC15.98■□□□□ 0.15
NDNQ99608 AP000347.1-202ENST00000435868 847 ntBASIC15.98■□□□□ 0.15
NDNQ99608 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.98■□□□□ 0.15
NDNQ99608 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.98■□□□□ 0.15
NDNQ99608 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 C20orf181-201ENST00000623918 480 ntBASIC15.98■□□□□ 0.15
NDNQ99608 AC136621.1-201ENST00000624017 2304 ntBASIC15.98■□□□□ 0.15
NDNQ99608 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.98■□□□□ 0.15
NDNQ99608 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms