Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.03■□□□□ -0
NR1H4Q96RI1 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.02■□□□□ -0
NR1H4Q96RI1 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.02■□□□□ -0
NR1H4Q96RI1 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
NR1H4Q96RI1 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.02■□□□□ -0
NR1H4Q96RI1 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.02■□□□□ -0
NR1H4Q96RI1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.02■□□□□ -0
NR1H4Q96RI1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.02■□□□□ -0
NR1H4Q96RI1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H4Q96RI1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.02■□□□□ -0
NR1H4Q96RI1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.02■□□□□ -0
NR1H4Q96RI1 AL590326.2-201ENST00000625139 305 ntBASIC15.02■□□□□ -0
NR1H4Q96RI1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.02□□□□□ -0.01
NR1H4Q96RI1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 IGHGP-201ENST00000390555 1178 ntBASIC15.01□□□□□ -0.01
NR1H4Q96RI1 FAM220CP-201ENST00000395253 831 ntBASIC15.01□□□□□ -0.01
NR1H4Q96RI1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 AL353732.1-201ENST00000569618 1459 ntBASIC15.01□□□□□ -0.01
NR1H4Q96RI1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H4Q96RI1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15□□□□□ -0.01
NR1H4Q96RI1 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 AC005622.1-201ENST00000636801 1703 ntBASIC15□□□□□ -0.01
NR1H4Q96RI1 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15□□□□□ -0.01
NR1H4Q96RI1 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms