Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.74■□□□□ 0.27
CASD1Q96PB1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.74■□□□□ 0.27
CASD1Q96PB1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.74■□□□□ 0.27
CASD1Q96PB1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CASD1Q96PB1 AC124067.4-201ENST00000519691 2379 ntBASIC16.74■□□□□ 0.27
CASD1Q96PB1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 NKILA-202ENST00000614771 2598 ntBASIC16.74■□□□□ 0.27
CASD1Q96PB1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.74■□□□□ 0.27
CASD1Q96PB1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.74■□□□□ 0.27
CASD1Q96PB1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASD1Q96PB1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 AC099548.2-209ENST00000480264 625 ntBASIC16.73■□□□□ 0.27
CASD1Q96PB1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 ZNF767P-206ENST00000513792 565 ntBASIC16.73■□□□□ 0.27
CASD1Q96PB1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.73■□□□□ 0.27
CASD1Q96PB1 BX539320.1-201ENST00000623759 877 ntBASIC16.73■□□□□ 0.27
CASD1Q96PB1 AC132938.4-201ENST00000623835 848 ntBASIC16.73■□□□□ 0.27
CASD1Q96PB1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.73■□□□□ 0.27
CASD1Q96PB1 AC069224.1-201ENST00000566372 1715 ntBASIC16.73■□□□□ 0.27
CASD1Q96PB1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASD1Q96PB1 MTHFR-217ENST00000641820 1569 ntBASIC16.72■□□□□ 0.27
CASD1Q96PB1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 KRT8P35-201ENST00000483942 1338 ntBASIC16.72■□□□□ 0.27
CASD1Q96PB1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.72■□□□□ 0.27
CASD1Q96PB1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASD1Q96PB1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms