Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 AC093512.1-201ENST00000617969 520 ntBASIC16.15■□□□□ 0.18
RTP4Q96DX8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 TCAF2P1-201ENST00000291129 2421 ntBASIC16.15■□□□□ 0.18
RTP4Q96DX8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTP4Q96DX8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RTP4Q96DX8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RTP4Q96DX8 AL035456.1-201ENST00000456064 1369 ntBASIC16.14■□□□□ 0.17
RTP4Q96DX8 KRT8P12-202ENST00000472924 1397 ntBASIC16.14■□□□□ 0.17
RTP4Q96DX8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 RBPMS2P1-201ENST00000437762 623 ntBASIC16.14■□□□□ 0.17
RTP4Q96DX8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 AC026150.2-201ENST00000564693 1156 ntBASIC16.14■□□□□ 0.17
RTP4Q96DX8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.14■□□□□ 0.17
RTP4Q96DX8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTP4Q96DX8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.13■□□□□ 0.17
RTP4Q96DX8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.13■□□□□ 0.17
RTP4Q96DX8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.13■□□□□ 0.17
RTP4Q96DX8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTP4Q96DX8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms