Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 AC068137.2-201ENST00000605408 478 ntBASIC14.31□□□□□ -0.12
PTP4A1Q93096 SPTSSB-204ENST00000617024 1292 ntBASIC14.31□□□□□ -0.12
PTP4A1Q93096 AL513190.1-201ENST00000621254 727 ntBASIC14.31□□□□□ -0.12
PTP4A1Q93096 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 REXO1L1P-202ENST00000608646 1974 ntBASIC14.31□□□□□ -0.12
PTP4A1Q93096 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTP4A1Q93096 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.31□□□□□ -0.12
PTP4A1Q93096 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AC002056.1-201ENST00000395613 760 ntBASIC14.3□□□□□ -0.12
PTP4A1Q93096 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AC023274.1-201ENST00000418278 595 ntBASIC14.3□□□□□ -0.12
PTP4A1Q93096 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTP4A1Q93096 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PTP4A1Q93096 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 PGAM5P1-201ENST00000518923 814 ntBASIC14.29□□□□□ -0.12
PTP4A1Q93096 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 AC112191.1-201ENST00000523689 701 ntBASIC14.29□□□□□ -0.12
PTP4A1Q93096 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms