Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
APH1BQ8WW43 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1BQ8WW43 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1BQ8WW43 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
APH1BQ8WW43 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1BQ8WW43 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 AC006504.5-208ENST00000588784 2401 ntBASIC14.37□□□□□ -0.11
APH1BQ8WW43 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 CXCL1P1-201ENST00000502804 216 ntBASIC14.37□□□□□ -0.11
APH1BQ8WW43 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 AC004790.2-201ENST00000623588 572 ntBASIC14.37□□□□□ -0.11
APH1BQ8WW43 AP000550.4-202ENST00000639755 178 ntBASIC14.37□□□□□ -0.11
APH1BQ8WW43 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1BQ8WW43 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1BQ8WW43 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 RPS2P1-201ENST00000434010 821 ntBASIC14.36□□□□□ -0.11
APH1BQ8WW43 AC108073.2-201ENST00000464002 357 ntBASIC14.36□□□□□ -0.11
APH1BQ8WW43 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 AC109635.5-201ENST00000533593 962 ntBASIC14.36□□□□□ -0.11
APH1BQ8WW43 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 REXO1L6P-202ENST00000619970 1078 ntBASIC14.36□□□□□ -0.11
APH1BQ8WW43 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
APH1BQ8WW43 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1BQ8WW43 BX640514.1-201ENST00000583223 1918 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms