Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS37AQ8NEZ2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VPS37AQ8NEZ2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VPS37AQ8NEZ2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
VPS37AQ8NEZ2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
VPS37AQ8NEZ2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VPS37AQ8NEZ2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 IL9RP2-201ENST00000423948 1312 ntBASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 AL691432.1-201ENST00000596308 1422 ntBASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 AC027601.4-201ENST00000611259 610 ntBASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 AC008267.7-201ENST00000624570 1194 ntBASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS37AQ8NEZ2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms