Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NUS1P3-201ENST00000423502 862 ntBASIC12.44□□□□□ -0.42
C3orf56Q8N813 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 ZNF767P-206ENST00000513792 565 ntBASIC12.44□□□□□ -0.42
C3orf56Q8N813 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 LINC01115-203ENST00000606068 577 ntBASIC12.44□□□□□ -0.42
C3orf56Q8N813 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
C3orf56Q8N813 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 Z97205.2-201ENST00000564697 1639 ntBASIC12.44□□□□□ -0.42
C3orf56Q8N813 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 AL138781.2-201ENST00000617896 1843 ntBASIC12.44□□□□□ -0.42
C3orf56Q8N813 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.44□□□□□ -0.42
C3orf56Q8N813 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CYP4F24P-201ENST00000586049 1580 ntBASIC12.43□□□□□ -0.42
C3orf56Q8N813 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AP001063.1-201ENST00000568332 529 ntBASIC12.43□□□□□ -0.42
C3orf56Q8N813 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.43□□□□□ -0.42
C3orf56Q8N813 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AC008687.7-202ENST00000637404 953 ntBASIC12.43□□□□□ -0.42
C3orf56Q8N813 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms