Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 AC013268.4-201ENST00000637413 2228 ntBASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 GRK6P1-201ENST00000400595 1711 ntBASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 AL590627.1-203ENST00000421194 1026 ntBASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 RNA5SP416-201ENST00000516838 111 ntBASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 AC134407.2-201ENST00000625089 1978 ntBASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC50Q8IVM0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 PPT1-215ENST00000641471 2368 ntBASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 AC097376.2-205ENST00000610159 5334 ntBASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 AC104581.4-201ENST00000623126 3052 ntBASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 AC011477.6-201ENST00000604980 1927 ntBASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC50Q8IVM0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.83■□□□□ 0.29
CCDC50Q8IVM0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC50Q8IVM0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC50Q8IVM0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC50Q8IVM0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC50Q8IVM0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC50Q8IVM0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 MED15P5-201ENST00000423150 992 ntBASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms