Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 AC023024.2-201ENST00000623561 1993 ntBASIC16.18■□□□□ 0.18
CROCCP2Q86T23 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CROCCP2Q86T23 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 SCARNA2-201ENST00000458748 420 ntBASIC16.17■□□□□ 0.18
CROCCP2Q86T23 FAM86EP-206ENST00000510506 987 ntBASIC16.17■□□□□ 0.18
CROCCP2Q86T23 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 AC243562.2-201ENST00000561247 970 ntBASIC16.17■□□□□ 0.18
CROCCP2Q86T23 AL355877.3-201ENST00000622820 899 ntBASIC16.17■□□□□ 0.18
CROCCP2Q86T23 AL645728.2-201ENST00000641974 660 ntBASIC16.17■□□□□ 0.18
CROCCP2Q86T23 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 AL589702.1-201ENST00000641229 1509 ntBASIC16.17■□□□□ 0.18
CROCCP2Q86T23 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CROCCP2Q86T23 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 MIR3180-1-201ENST00000580374 94 ntBASIC16.16■□□□□ 0.18
CROCCP2Q86T23 MIR3180-3-201ENST00000584616 94 ntBASIC16.16■□□□□ 0.18
CROCCP2Q86T23 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 AC008667.4-201ENST00000607370 168 ntBASIC16.16■□□□□ 0.18
CROCCP2Q86T23 AC009090.5-201ENST00000624886 2285 ntBASIC16.16■□□□□ 0.18
CROCCP2Q86T23 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CROCCP2Q86T23 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 AC126335.2-201ENST00000623362 4637 ntBASIC16.15■□□□□ 0.18
CROCCP2Q86T23 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 WASH3P-207ENST00000560956 1394 ntBASIC16.15■□□□□ 0.18
CROCCP2Q86T23 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 FO538757.1-201ENST00000623083 1397 ntBASIC16.15■□□□□ 0.18
CROCCP2Q86T23 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.15■□□□□ 0.18
CROCCP2Q86T23 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms