Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13BQ7Z7G8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13BQ7Z7G8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 AC011477.6-201ENST00000604980 1927 ntBASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 FOS-204ENST00000554617 796 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 HOMER2P2-201ENST00000451621 847 ntBASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 AC244452.3-201ENST00000636814 210 ntBASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13BQ7Z7G8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 RPL13AP19-201ENST00000434320 584 ntBASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 PPY2P-201ENST00000582808 702 ntBASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13BQ7Z7G8 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms