Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 PDPK2P-202ENST00000562415 1191 ntBASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 AC008667.4-201ENST00000607370 168 ntBASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 LINC00552-201ENST00000625151 2579 ntBASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 CICP4-201ENST00000447359 2812 ntBASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 AC004835.2-201ENST00000603762 682 ntBASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 AC232323.1-201ENST00000540724 2099 ntBASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 REXO1L5P-201ENST00000622260 2098 ntBASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 AC013726.1-201ENST00000563747 2285 ntBASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNI2Q6ZMN8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CCNI2Q6ZMN8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.89■□□□□ 0.3
CCNI2Q6ZMN8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AL390755.1-201ENST00000623716 2027 ntBASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AC087163.2-201ENST00000457299 853 ntBASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AC025678.2-201ENST00000562061 970 ntBASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AC004790.2-201ENST00000623588 572 ntBASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.89■□□□□ 0.29
CCNI2Q6ZMN8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms