Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 CNN2P11-201ENST00000429351 262 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 RBPMS2P1-201ENST00000437762 623 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AC004967.1-201ENST00000453589 447 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AL139010.1-201ENST00000454878 894 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AC023141.5-201ENST00000458585 616 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 HLA-J-203ENST00000494367 1087 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AL133215.2-201ENST00000609242 977 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AP001059.3-201ENST00000619053 235 ntBASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NHLRC1Q6VVB1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 CYP4F24P-201ENST00000586049 1580 ntBASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AL139400.1-201ENST00000366220 510 ntBASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 KRT18P13-201ENST00000400056 1290 ntBASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AL009178.2-201ENST00000597278 2719 ntBASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NHLRC1Q6VVB1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms