Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC003101.2-201ENST00000612557 442 ntBASIC15.77■□□□□ 0.12
ZNF549Q6P9A3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.77■□□□□ 0.12
ZNF549Q6P9A3 AC134684.3-201ENST00000641758 218 ntBASIC15.77■□□□□ 0.12
ZNF549Q6P9A3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF549Q6P9A3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF549Q6P9A3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.77■□□□□ 0.11
ZNF549Q6P9A3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 NORAD-201ENST00000565493 5339 ntBASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 AL353705.2-201ENST00000428243 662 ntBASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 HIST3H2BA-201ENST00000436555 524 ntBASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 AC027612.4-201ENST00000605371 583 ntBASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF549Q6P9A3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 AC254562.1-201ENST00000417586 456 ntBASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 AP006288.1-201ENST00000446065 395 ntBASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 MIR4453-201ENST00000584019 89 ntBASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF549Q6P9A3 AC007967.4-201ENST00000614700 386 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms