Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
VBP1P61758 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.3□□□□□ -0.12
VBP1P61758 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.3□□□□□ -0.12
VBP1P61758 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.3□□□□□ -0.12
VBP1P61758 TSPY22P-201ENST00000427496 604 ntBASIC14.3□□□□□ -0.12
VBP1P61758 AC246785.2-201ENST00000432512 513 ntBASIC14.3□□□□□ -0.12
VBP1P61758 KRT18P38-201ENST00000449496 1282 ntBASIC14.3□□□□□ -0.12
VBP1P61758 PAWRP1-201ENST00000451083 565 ntBASIC14.3□□□□□ -0.12
VBP1P61758 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.3□□□□□ -0.12
VBP1P61758 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.3□□□□□ -0.12
VBP1P61758 INTS4P1-201ENST00000438455 1935 ntBASIC14.3□□□□□ -0.12
VBP1P61758 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 ZBED1P1-201ENST00000502364 1930 ntBASIC14.3□□□□□ -0.12
VBP1P61758 KRT17P2-201ENST00000300992 1314 ntBASIC14.3□□□□□ -0.12
VBP1P61758 KRT18P22-201ENST00000402024 1347 ntBASIC14.3□□□□□ -0.12
VBP1P61758 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VBP1P61758 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VBP1P61758 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VBP1P61758 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VBP1P61758 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VBP1P61758 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
VBP1P61758 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.3□□□□□ -0.12
VBP1P61758 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VBP1P61758 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 HSPA7-201ENST00000445535 1927 ntBASIC14.29□□□□□ -0.12
VBP1P61758 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 AL359183.1-201ENST00000623796 2132 ntBASIC14.29□□□□□ -0.12
VBP1P61758 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VBP1P61758 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VBP1P61758 ARMC10P1-201ENST00000313754 855 ntBASIC14.29□□□□□ -0.12
VBP1P61758 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 AC112907.2-201ENST00000448639 330 ntBASIC14.29□□□□□ -0.12
VBP1P61758 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.29□□□□□ -0.12
VBP1P61758 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.29□□□□□ -0.12
VBP1P61758 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.29□□□□□ -0.12
VBP1P61758 AC090616.6-201ENST00000582640 721 ntBASIC14.29□□□□□ -0.12
VBP1P61758 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
VBP1P61758 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.29□□□□□ -0.12
VBP1P61758 REXO1L1P-202ENST00000608646 1974 ntBASIC14.29□□□□□ -0.12
VBP1P61758 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.29□□□□□ -0.12
VBP1P61758 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VBP1P61758 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VBP1P61758 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VBP1P61758 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.28□□□□□ -0.12
VBP1P61758 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms