Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.24□□□□□ -0.61
CKS1BP61024 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.24□□□□□ -0.61
CKS1BP61024 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.24□□□□□ -0.61
CKS1BP61024 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.24□□□□□ -0.61
CKS1BP61024 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.24□□□□□ -0.61
CKS1BP61024 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.24□□□□□ -0.61
CKS1BP61024 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CKS1BP61024 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.24□□□□□ -0.61
CKS1BP61024 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.24□□□□□ -0.61
CKS1BP61024 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
CKS1BP61024 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CKS1BP61024 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS1BP61024 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS1BP61024 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CKS1BP61024 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 AC023157.3-201ENST00000619086 2088 ntBASIC11.23□□□□□ -0.61
CKS1BP61024 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 CHCHD2P8-201ENST00000429873 447 ntBASIC11.23□□□□□ -0.61
CKS1BP61024 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.23□□□□□ -0.61
CKS1BP61024 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
CKS1BP61024 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
CKS1BP61024 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS1BP61024 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.23□□□□□ -0.61
CKS1BP61024 NTF6B-201ENST00000591913 560 ntBASIC11.23□□□□□ -0.61
CKS1BP61024 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 AC012306.2-201ENST00000609350 630 ntBASIC11.23□□□□□ -0.61
CKS1BP61024 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CKS1BP61024 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS1BP61024 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.23□□□□□ -0.61
CKS1BP61024 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS1BP61024 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.23□□□□□ -0.61
CKS1BP61024 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS1BP61024 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS1BP61024 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 AC092117.1-201ENST00000621230 3250 ntBASIC11.22□□□□□ -0.61
CKS1BP61024 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms