Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 COX5BP1-201ENST00000507622 393 ntBASIC13.24□□□□□ -0.29
RIPPLY3P57055 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 NPM1P43-201ENST00000558669 786 ntBASIC13.24□□□□□ -0.29
RIPPLY3P57055 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 AC018695.6-201ENST00000614011 534 ntBASIC13.24□□□□□ -0.29
RIPPLY3P57055 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.24□□□□□ -0.29
RIPPLY3P57055 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIPPLY3P57055 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 AC025271.4-201ENST00000621477 1726 ntBASIC13.23□□□□□ -0.29
RIPPLY3P57055 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 CYP46A4P-201ENST00000414953 267 ntBASIC13.23□□□□□ -0.29
RIPPLY3P57055 AL008707.1-201ENST00000422498 534 ntBASIC13.23□□□□□ -0.29
RIPPLY3P57055 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 KRT90P-201ENST00000549264 1064 ntBASIC13.23□□□□□ -0.29
RIPPLY3P57055 AL022344.2-201ENST00000568976 968 ntBASIC13.23□□□□□ -0.29
RIPPLY3P57055 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 AC091167.2-201ENST00000579581 588 ntBASIC13.23□□□□□ -0.29
RIPPLY3P57055 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms