Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATP1B3P54709 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATP1B3P54709 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.85□□□□□ -0.19
ATP1B3P54709 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
ATP1B3P54709 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
ATP1B3P54709 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ATP1B3P54709 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.85□□□□□ -0.19
ATP1B3P54709 KRT18P2-201ENST00000447938 1258 ntBASIC13.85□□□□□ -0.19
ATP1B3P54709 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.85□□□□□ -0.19
ATP1B3P54709 RNA5SP416-201ENST00000516838 111 ntBASIC13.85□□□□□ -0.19
ATP1B3P54709 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.85□□□□□ -0.19
ATP1B3P54709 PDPK2P-202ENST00000562415 1191 ntBASIC13.85□□□□□ -0.19
ATP1B3P54709 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.85□□□□□ -0.19
ATP1B3P54709 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.85□□□□□ -0.19
ATP1B3P54709 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.85□□□□□ -0.19
ATP1B3P54709 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 AC011477.6-201ENST00000604980 1927 ntBASIC13.85□□□□□ -0.19
ATP1B3P54709 TCAF2P1-201ENST00000291129 2421 ntBASIC13.85□□□□□ -0.19
ATP1B3P54709 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.85□□□□□ -0.19
ATP1B3P54709 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 IL9RP2-201ENST00000423948 1312 ntBASIC13.85□□□□□ -0.19
ATP1B3P54709 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATP1B3P54709 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.85□□□□□ -0.19
ATP1B3P54709 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.84□□□□□ -0.19
ATP1B3P54709 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.84□□□□□ -0.19
ATP1B3P54709 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 AC024267.1-201ENST00000582320 895 ntBASIC13.84□□□□□ -0.19
ATP1B3P54709 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.84□□□□□ -0.19
ATP1B3P54709 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ATP1B3P54709 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ATP1B3P54709 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATP1B3P54709 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
ATP1B3P54709 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.84□□□□□ -0.19
ATP1B3P54709 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATP1B3P54709 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ATP1B3P54709 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ATP1B3P54709 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ATP1B3P54709 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ATP1B3P54709 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ATP1B3P54709 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ATP1B3P54709 AC023908.3-201ENST00000564211 3047 ntBASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms