Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 AC126177.1-201ENST00000547829 2218 ntBASIC15.76■□□□□ 0.11
ZNF140P52738 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF140P52738 AC013268.4-201ENST00000637413 2228 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF140P52738 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
ZNF140P52738 AC241585.1-201ENST00000433527 519 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 KRT18P64-201ENST00000434946 1219 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 AC009477.1-201ENST00000452936 217 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 SDHAP3-202ENST00000515467 728 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF140P52738 AC044860.1-202ENST00000559481 777 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 AC104640.1-201ENST00000562617 2109 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF140P52738 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF140P52738 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.75■□□□□ 0.11
ZNF140P52738 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF140P52738 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ZNF140P52738 LINC01115-203ENST00000606068 577 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 AL390754.1-201ENST00000619088 582 ntBASIC15.75■□□□□ 0.11
ZNF140P52738 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF140P52738 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF140P52738 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF140P52738 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF140P52738 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF140P52738 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
ZNF140P52738 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ZNF140P52738 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.74■□□□□ 0.11
ZNF140P52738 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ZNF140P52738 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ZNF140P52738 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.74■□□□□ 0.11
ZNF140P52738 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.74■□□□□ 0.11
ZNF140P52738 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ZNF140P52738 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.74■□□□□ 0.11
ZNF140P52738 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.74■□□□□ 0.11
ZNF140P52738 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.74■□□□□ 0.11
ZNF140P52738 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.74■□□□□ 0.11
ZNF140P52738 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF140P52738 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.74■□□□□ 0.11
ZNF140P52738 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.74■□□□□ 0.11
ZNF140P52738 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.74■□□□□ 0.11
ZNF140P52738 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.74■□□□□ 0.11
ZNF140P52738 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms