Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF144AP50876 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RNF144AP50876 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 AC092127.1-201ENST00000567093 3455 ntBASIC14.83□□□□□ -0.04
RNF144AP50876 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.83□□□□□ -0.04
RNF144AP50876 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RNF144AP50876 RBPMS2P1-201ENST00000437762 623 ntBASIC14.83□□□□□ -0.04
RNF144AP50876 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.83□□□□□ -0.04
RNF144AP50876 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.83□□□□□ -0.04
RNF144AP50876 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 AC023824.1-201ENST00000562945 2975 ntBASIC14.83□□□□□ -0.04
RNF144AP50876 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF144AP50876 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF144AP50876 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF144AP50876 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF144AP50876 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 AL161772.1-201ENST00000610494 4412 ntBASIC14.82□□□□□ -0.04
RNF144AP50876 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RNF144AP50876 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 MIR1233-2-201ENST00000408138 82 ntBASIC14.82□□□□□ -0.04
RNF144AP50876 MIR1233-1-201ENST00000408722 82 ntBASIC14.82□□□□□ -0.04
RNF144AP50876 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF144AP50876 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF144AP50876 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF144AP50876 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RNF144AP50876 AC006213.4-201ENST00000616184 634 ntBASIC14.82□□□□□ -0.04
RNF144AP50876 AL691403.2-201ENST00000618460 490 ntBASIC14.82□□□□□ -0.04
RNF144AP50876 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RNF144AP50876 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNF144AP50876 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF144AP50876 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF144AP50876 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms