Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.62■□□□□ 0.57
NEDD4P46934 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.62■□□□□ 0.57
NEDD4P46934 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.62■□□□□ 0.57
NEDD4P46934 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
NEDD4P46934 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NEDD4P46934 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD4P46934 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD4P46934 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD4P46934 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD4P46934 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD4P46934 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NEDD4P46934 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD4P46934 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD4P46934 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD4P46934 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD4P46934 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NEDD4P46934 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD4P46934 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.61■□□□□ 0.57
NEDD4P46934 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD4P46934 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD4P46934 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.61■□□□□ 0.57
NEDD4P46934 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.61■□□□□ 0.57
NEDD4P46934 AL132655.2-201ENST00000596276 594 ntBASIC18.61■□□□□ 0.57
NEDD4P46934 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NEDD4P46934 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NEDD4P46934 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD4P46934 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD4P46934 AC104640.1-201ENST00000562617 2109 ntBASIC18.61■□□□□ 0.57
NEDD4P46934 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.61■□□□□ 0.57
NEDD4P46934 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NEDD4P46934 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD4P46934 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NEDD4P46934 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.6■□□□□ 0.57
NEDD4P46934 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 AC127383.1-201ENST00000444697 1800 ntBASIC18.6■□□□□ 0.57
NEDD4P46934 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.6■□□□□ 0.57
NEDD4P46934 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD4P46934 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD4P46934 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.6■□□□□ 0.57
NEDD4P46934 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NEDD4P46934 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NEDD4P46934 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NEDD4P46934 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 AC103702.1-201ENST00000548801 2630 ntBASIC18.6■□□□□ 0.57
NEDD4P46934 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.6■□□□□ 0.57
NEDD4P46934 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
NEDD4P46934 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.6■□□□□ 0.57
NEDD4P46934 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEDD4P46934 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NEDD4P46934 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.59■□□□□ 0.57
NEDD4P46934 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.59■□□□□ 0.57
NEDD4P46934 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.59■□□□□ 0.57
NEDD4P46934 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms