Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.08■□□□□ 0.48
COPB2P35606 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.08■□□□□ 0.48
COPB2P35606 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.08■□□□□ 0.48
COPB2P35606 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 AL033527.4-201ENST00000641026 673 ntBASIC18.08■□□□□ 0.48
COPB2P35606 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
COPB2P35606 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.08■□□□□ 0.48
COPB2P35606 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.08■□□□□ 0.48
COPB2P35606 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 AC134407.2-201ENST00000625089 1978 ntBASIC18.08■□□□□ 0.48
COPB2P35606 PDIA3P1-201ENST00000471856 1510 ntBASIC18.08■□□□□ 0.48
COPB2P35606 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPB2P35606 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
COPB2P35606 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
COPB2P35606 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COPB2P35606 ANKRD19P-201ENST00000338192 862 ntBASIC18.07■□□□□ 0.48
COPB2P35606 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.07■□□□□ 0.48
COPB2P35606 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 AP001063.1-201ENST00000568332 529 ntBASIC18.07■□□□□ 0.48
COPB2P35606 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.07■□□□□ 0.48
COPB2P35606 AC097359.3-201ENST00000603982 1210 ntBASIC18.07■□□□□ 0.48
COPB2P35606 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 AL139384.1-201ENST00000612143 3047 ntBASIC18.07■□□□□ 0.48
COPB2P35606 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COPB2P35606 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.07■□□□□ 0.48
COPB2P35606 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPB2P35606 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COPB2P35606 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
COPB2P35606 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.06■□□□□ 0.48
COPB2P35606 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.06■□□□□ 0.48
COPB2P35606 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPB2P35606 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPB2P35606 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.06■□□□□ 0.48
COPB2P35606 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPB2P35606 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPB2P35606 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPB2P35606 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
COPB2P35606 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPB2P35606 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPB2P35606 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
COPB2P35606 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COPB2P35606 CTBP2P5-201ENST00000454986 1264 ntBASIC18.06■□□□□ 0.48
COPB2P35606 FO681548.1-201ENST00000455617 1132 ntBASIC18.06■□□□□ 0.48
COPB2P35606 VDAC1P7-201ENST00000462417 847 ntBASIC18.06■□□□□ 0.48
COPB2P35606 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.06■□□□□ 0.48
COPB2P35606 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.06■□□□□ 0.48
COPB2P35606 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.06■□□□□ 0.48
COPB2P35606 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.06■□□□□ 0.48
COPB2P35606 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.06■□□□□ 0.48
COPB2P35606 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
COPB2P35606 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.06■□□□□ 0.48
COPB2P35606 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms