Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 RPS8P6-201ENST00000426177 609 ntBASIC16.8■□□□□ 0.28
PCK1P35558 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.8■□□□□ 0.28
PCK1P35558 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.8■□□□□ 0.28
PCK1P35558 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.8■□□□□ 0.28
PCK1P35558 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.8■□□□□ 0.28
PCK1P35558 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.8■□□□□ 0.28
PCK1P35558 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 AP3S2-216ENST00000617003 1561 ntBASIC16.8■□□□□ 0.28
PCK1P35558 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.79■□□□□ 0.28
PCK1P35558 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCK1P35558 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 AC004987.2-201ENST00000395959 1148 ntBASIC16.79■□□□□ 0.28
PCK1P35558 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PCK1P35558 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.79■□□□□ 0.28
PCK1P35558 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.79■□□□□ 0.28
PCK1P35558 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.79■□□□□ 0.28
PCK1P35558 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 MIR3687-2-201ENST00000577708 61 ntBASIC16.79■□□□□ 0.28
PCK1P35558 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 MIR3687-1-201ENST00000614492 61 ntBASIC16.79■□□□□ 0.28
PCK1P35558 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCK1P35558 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
PCK1P35558 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCK1P35558 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCK1P35558 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.79■□□□□ 0.28
PCK1P35558 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCK1P35558 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.78■□□□□ 0.28
PCK1P35558 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCK1P35558 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.78■□□□□ 0.28
PCK1P35558 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCK1P35558 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 RPSAP43-201ENST00000402237 625 ntBASIC16.78■□□□□ 0.28
PCK1P35558 BX842568.4-201ENST00000421222 227 ntBASIC16.78■□□□□ 0.28
PCK1P35558 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.78■□□□□ 0.28
PCK1P35558 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.78■□□□□ 0.28
PCK1P35558 AC112482.1-201ENST00000492080 688 ntBASIC16.78■□□□□ 0.28
PCK1P35558 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.78■□□□□ 0.28
PCK1P35558 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.78■□□□□ 0.28
PCK1P35558 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.78■□□□□ 0.28
PCK1P35558 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.78■□□□□ 0.28
PCK1P35558 RARRES2P9-201ENST00000565168 469 ntBASIC16.78■□□□□ 0.28
PCK1P35558 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.78■□□□□ 0.28
PCK1P35558 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms