Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TCAF2P1-201ENST00000291129 2421 ntBASIC17.42■□□□□ 0.38
KRT9P35527 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT9P35527 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT9P35527 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT9P35527 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT9P35527 AC004832.2-201ENST00000426397 482 ntBASIC17.42■□□□□ 0.38
KRT9P35527 PRYP6-201ENST00000514804 343 ntBASIC17.42■□□□□ 0.38
KRT9P35527 FAM86C2P-203ENST00000528684 1004 ntBASIC17.42■□□□□ 0.38
KRT9P35527 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.42■□□□□ 0.38
KRT9P35527 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 MTDHP5-201ENST00000598980 586 ntBASIC17.42■□□□□ 0.38
KRT9P35527 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 AC068587.6-202ENST00000641839 5619 ntBASIC17.42■□□□□ 0.38
KRT9P35527 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT9P35527 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 AC091951.1-201ENST00000512854 2465 ntBASIC17.42■□□□□ 0.38
KRT9P35527 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 AKAP8P1-201ENST00000434743 1349 ntBASIC17.42■□□□□ 0.38
KRT9P35527 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 C18orf15-201ENST00000623680 2534 ntBASIC17.42■□□□□ 0.38
KRT9P35527 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT9P35527 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT9P35527 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KRT9P35527 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT9P35527 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
KRT9P35527 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
KRT9P35527 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT9P35527 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KRT9P35527 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT9P35527 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT9P35527 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT9P35527 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT9P35527 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT9P35527 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT9P35527 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT9P35527 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT9P35527 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT9P35527 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT9P35527 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT9P35527 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.4■□□□□ 0.38
KRT9P35527 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT9P35527 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT9P35527 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KRT9P35527 AC018892.3-201ENST00000623986 2499 ntBASIC17.4■□□□□ 0.38
KRT9P35527 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT9P35527 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT9P35527 TFAMP1-201ENST00000412727 736 ntBASIC17.4■□□□□ 0.38
KRT9P35527 AL355306.1-201ENST00000415580 579 ntBASIC17.4■□□□□ 0.38
KRT9P35527 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 AP000347.1-202ENST00000435868 847 ntBASIC17.4■□□□□ 0.38
KRT9P35527 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.4■□□□□ 0.38
KRT9P35527 AL671883.3-201ENST00000603274 991 ntBASIC17.4■□□□□ 0.38
KRT9P35527 C20orf181-201ENST00000623918 480 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms