Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 AL607033.1-201ENST00000623900 1599 ntBASIC16.4■□□□□ 0.22
PTPN7P35236 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN7P35236 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 AL022342.1-201ENST00000400363 863 ntBASIC16.4■□□□□ 0.22
PTPN7P35236 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
PTPN7P35236 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN7P35236 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN7P35236 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.4■□□□□ 0.22
PTPN7P35236 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
PTPN7P35236 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN7P35236 DBET-201ENST00000630918 3363 ntBASIC16.4■□□□□ 0.22
PTPN7P35236 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN7P35236 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN7P35236 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.22
PTPN7P35236 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.39■□□□□ 0.22
PTPN7P35236 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.39■□□□□ 0.22
PTPN7P35236 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.39■□□□□ 0.22
PTPN7P35236 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN7P35236 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN7P35236 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTPN7P35236 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN7P35236 FO393414.2-201ENST00000405153 598 ntBASIC16.39■□□□□ 0.21
PTPN7P35236 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 HIST3H2BA-201ENST00000436555 524 ntBASIC16.39■□□□□ 0.21
PTPN7P35236 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN7P35236 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN7P35236 AC005829.1-201ENST00000570002 483 ntBASIC16.39■□□□□ 0.21
PTPN7P35236 AC105021.1-202ENST00000570572 669 ntBASIC16.39■□□□□ 0.21
PTPN7P35236 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
PTPN7P35236 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN7P35236 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
PTPN7P35236 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN7P35236 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN7P35236 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN7P35236 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN7P35236 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PTPN7P35236 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
PTPN7P35236 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN7P35236 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTPN7P35236 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PTPN7P35236 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTPN7P35236 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN7P35236 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN7P35236 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN7P35236 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN7P35236 AL627223.1-201ENST00000416693 442 ntBASIC16.38■□□□□ 0.21
PTPN7P35236 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms