Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 AC011270.2-201ENST00000624293 2550 ntBASIC14.33□□□□□ -0.11
HLA-DQA2P01906 AC104640.1-201ENST00000562617 2109 ntBASIC14.33□□□□□ -0.11
HLA-DQA2P01906 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DQA2P01906 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AC126177.1-201ENST00000547829 2218 ntBASIC14.33□□□□□ -0.12
HLA-DQA2P01906 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 RARRES2P8-201ENST00000566335 367 ntBASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AP002472.1-201ENST00000577490 586 ntBASIC14.33□□□□□ -0.12
HLA-DQA2P01906 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DQA2P01906 AC134407.2-201ENST00000625089 1978 ntBASIC14.33□□□□□ -0.12
HLA-DQA2P01906 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AP001282.1-201ENST00000531301 1499 ntBASIC14.32□□□□□ -0.12
HLA-DQA2P01906 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AL591424.1-201ENST00000442569 1213 ntBASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 KRT18P3-201ENST00000451602 1288 ntBASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AC027601.4-201ENST00000611259 610 ntBASIC14.32□□□□□ -0.12
HLA-DQA2P01906 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AC011477.6-201ENST00000604980 1927 ntBASIC14.32□□□□□ -0.12
HLA-DQA2P01906 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms