Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 AC067930.6-201ENST00000623257 4947 ntBASIC18.45■□□□□ 0.54
CDKL5O76039 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDKL5O76039 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.45■□□□□ 0.54
CDKL5O76039 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CDKL5O76039 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDKL5O76039 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 AL139400.1-201ENST00000366220 510 ntBASIC18.45■□□□□ 0.54
CDKL5O76039 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDKL5O76039 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 HIST3H2BA-201ENST00000436555 524 ntBASIC18.45■□□□□ 0.54
CDKL5O76039 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.45■□□□□ 0.54
CDKL5O76039 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.45■□□□□ 0.54
CDKL5O76039 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.45■□□□□ 0.54
CDKL5O76039 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 AC004449.1-201ENST00000564240 433 ntBASIC18.45■□□□□ 0.54
CDKL5O76039 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.45■□□□□ 0.54
CDKL5O76039 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.45■□□□□ 0.54
CDKL5O76039 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDKL5O76039 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL5O76039 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDKL5O76039 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKL5O76039 SSR4P1-203ENST00000599569 2260 ntBASIC18.44■□□□□ 0.54
CDKL5O76039 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDKL5O76039 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 HLA-V-204ENST00000476601 1289 ntBASIC18.44■□□□□ 0.54
CDKL5O76039 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKL5O76039 AC015911.4-201ENST00000588022 1070 ntBASIC18.44■□□□□ 0.54
CDKL5O76039 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDKL5O76039 MIR6069-201ENST00000620069 79 ntBASIC18.44■□□□□ 0.54
CDKL5O76039 Z92544.3-201ENST00000624747 417 ntBASIC18.44■□□□□ 0.54
CDKL5O76039 AC092384.3-202ENST00000564646 2873 ntBASIC18.44■□□□□ 0.54
CDKL5O76039 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKL5O76039 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CDKL5O76039 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKL5O76039 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKL5O76039 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKL5O76039 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 NORAD-201ENST00000565493 5339 ntBASIC18.43■□□□□ 0.54
CDKL5O76039 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.43■□□□□ 0.54
CDKL5O76039 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDKL5O76039 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.43■□□□□ 0.54
CDKL5O76039 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.43■□□□□ 0.54
CDKL5O76039 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKL5O76039 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms