Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH4O75427 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH4O75427 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH4O75427 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.5■□□□□ 0.23
LRCH4O75427 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.5■□□□□ 0.23
LRCH4O75427 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH4O75427 C18orf15-201ENST00000623680 2534 ntBASIC16.5■□□□□ 0.23
LRCH4O75427 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 AL596257.1-201ENST00000641463 2694 ntBASIC16.5■□□□□ 0.23
LRCH4O75427 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH4O75427 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH4O75427 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 RPL37AP1-201ENST00000412502 279 ntBASIC16.49■□□□□ 0.23
LRCH4O75427 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH4O75427 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH4O75427 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH4O75427 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 SPDYE12P-201ENST00000618416 771 ntBASIC16.49■□□□□ 0.23
LRCH4O75427 AC006486.2-201ENST00000624246 2199 ntBASIC16.49■□□□□ 0.23
LRCH4O75427 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LRCH4O75427 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH4O75427 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRCH4O75427 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH4O75427 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 TARDBPP1-201ENST00000442013 1203 ntBASIC16.48■□□□□ 0.23
LRCH4O75427 CNN2P2-201ENST00000443536 909 ntBASIC16.48■□□□□ 0.23
LRCH4O75427 CNN2P3-201ENST00000450201 906 ntBASIC16.48■□□□□ 0.23
LRCH4O75427 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.48■□□□□ 0.23
LRCH4O75427 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 AL136317.3-201ENST00000618497 906 ntBASIC16.48■□□□□ 0.23
LRCH4O75427 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.48■□□□□ 0.23
LRCH4O75427 AC023157.3-201ENST00000619086 2088 ntBASIC16.48■□□□□ 0.23
LRCH4O75427 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRCH4O75427 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms