Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.46□□□□□ -0.42
ZNF253O75346 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.46□□□□□ -0.42
ZNF253O75346 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ZNF253O75346 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF253O75346 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ZNF253O75346 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ZNF253O75346 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF253O75346 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.45□□□□□ -0.42
ZNF253O75346 AC245100.5-201ENST00000452108 331 ntBASIC12.45□□□□□ -0.42
ZNF253O75346 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF253O75346 KRT18P35-201ENST00000510488 1269 ntBASIC12.45□□□□□ -0.42
ZNF253O75346 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 OR7E14P-202ENST00000530490 1290 ntBASIC12.45□□□□□ -0.42
ZNF253O75346 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.45□□□□□ -0.42
ZNF253O75346 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF253O75346 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ZNF253O75346 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZNF253O75346 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 SSR4P1-203ENST00000599569 2260 ntBASIC12.45□□□□□ -0.42
ZNF253O75346 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF253O75346 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF253O75346 LINC00528-201ENST00000600723 2160 ntBASIC12.45□□□□□ -0.42
ZNF253O75346 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.44□□□□□ -0.42
ZNF253O75346 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 AC015656.1-201ENST00000624209 3578 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ZNF253O75346 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ZNF253O75346 RNU1-129P-201ENST00000384064 167 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms