Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.77■□□□□ 0.12
PCDHGA12O60330 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA12O60330 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGA12O60330 AC025048.3-201ENST00000590609 569 ntBASIC15.77■□□□□ 0.12
PCDHGA12O60330 AC005702.4-201ENST00000618393 416 ntBASIC15.77■□□□□ 0.12
PCDHGA12O60330 COX11-210ENST00000639671 696 ntBASIC15.77■□□□□ 0.12
PCDHGA12O60330 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDHGA12O60330 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGA12O60330 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
PCDHGA12O60330 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGA12O60330 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGA12O60330 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGA12O60330 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA12O60330 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 AL031731.1-201ENST00000642131 2094 ntBASIC15.76■□□□□ 0.11
PCDHGA12O60330 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 AC092658.1-201ENST00000505836 891 ntBASIC15.76■□□□□ 0.11
PCDHGA12O60330 AC104596.2-201ENST00000512793 793 ntBASIC15.76■□□□□ 0.11
PCDHGA12O60330 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 MIR8072-201ENST00000614241 80 ntBASIC15.76■□□□□ 0.11
PCDHGA12O60330 AL033527.5-201ENST00000641382 801 ntBASIC15.76■□□□□ 0.11
PCDHGA12O60330 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA12O60330 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGA12O60330 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 TMEM14DP-201ENST00000422205 345 ntBASIC15.75■□□□□ 0.11
PCDHGA12O60330 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms