Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL844908.2-201ENST00000609461 460 ntBASIC16.05■□□□□ 0.16
TRIM38O00635 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM38O00635 AL139011.1-202ENST00000642063 584 ntBASIC16.05■□□□□ 0.16
TRIM38O00635 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM38O00635 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM38O00635 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM38O00635 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.05■□□□□ 0.16
TRIM38O00635 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM38O00635 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM38O00635 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM38O00635 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM38O00635 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM38O00635 GGT3P-204ENST00000453783 1664 ntBASIC16.05■□□□□ 0.16
TRIM38O00635 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM38O00635 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 AC063926.3-201ENST00000624734 5658 ntBASIC16.04■□□□□ 0.16
TRIM38O00635 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM38O00635 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM38O00635 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRIM38O00635 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM38O00635 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 GGT4P-201ENST00000623672 1708 ntBASIC16.04■□□□□ 0.16
TRIM38O00635 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM38O00635 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM38O00635 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
TRIM38O00635 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM38O00635 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM38O00635 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM38O00635 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.03■□□□□ 0.16
TRIM38O00635 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM38O00635 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM38O00635 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM38O00635 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM38O00635 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 AC105021.1-202ENST00000570572 669 ntBASIC16.03■□□□□ 0.16
TRIM38O00635 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM38O00635 AC013467.2-201ENST00000605472 835 ntBASIC16.03■□□□□ 0.16
TRIM38O00635 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM38O00635 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM38O00635 AC006449.6-201ENST00000612330 2296 ntBASIC16.03■□□□□ 0.16
TRIM38O00635 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM38O00635 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 PKD1P5-201ENST00000532415 10291 ntBASIC16.03■□□□□ 0.16
TRIM38O00635 SNX33P1-201ENST00000592116 1762 ntBASIC16.03■□□□□ 0.16
TRIM38O00635 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM38O00635 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM38O00635 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms