Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 BANF1P1-201ENST00000553684 263 ntBASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMX2-CTNND1H3BSU7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.64■□□□□ 0.09
TMX2-CTNND1H3BSU7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC104581.4-201ENST00000623126 3052 ntBASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 DOC2GP-202ENST00000514950 1163 ntBASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 SDHAP3-202ENST00000515467 728 ntBASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms