Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AC243960.2-201ENST00000600996 747 ntBASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AC244669.2-201ENST00000612320 853 ntBASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AC106886.4-201ENST00000623557 2502 ntBASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 ACKR1-201ENST00000368121 1240 ntBASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AC093813.1-201ENST00000605066 256 ntBASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AC068587.10-201ENST00000641210 219 ntBASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 UBALD1-205ENST00000590891 2641 ntBASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 AL121723.1-201ENST00000445194 1519 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms