Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.06■□□□□ 0
MKKSQ9NPJ1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.06■□□□□ 0
MKKSQ9NPJ1 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.06■□□□□ 0
MKKSQ9NPJ1 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.06■□□□□ 0
MKKSQ9NPJ1 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.06■□□□□ 0
MKKSQ9NPJ1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MKKSQ9NPJ1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKKSQ9NPJ1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.05■□□□□ 0
MKKSQ9NPJ1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
MKKSQ9NPJ1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
MKKSQ9NPJ1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.05■□□□□ -0
MKKSQ9NPJ1 SPTLC1P1-201ENST00000447199 261 ntBASIC15.05■□□□□ -0
MKKSQ9NPJ1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 AC074044.1-201ENST00000609673 707 ntBASIC15.05■□□□□ -0
MKKSQ9NPJ1 AL109936.8-201ENST00000641772 604 ntBASIC15.05■□□□□ -0
MKKSQ9NPJ1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MKKSQ9NPJ1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MKKSQ9NPJ1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms