Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 AC079140.1-201ENST00000508039 487 ntBASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 KRT8P23-201ENST00000560090 1207 ntBASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 UXT-AS1-201ENST00000590504 1525 ntBASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC68Q9H2F9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 ADH5P3-201ENST00000433842 1137 ntBASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AC243562.1-201ENST00000560672 389 ntBASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AC243562.2-201ENST00000561247 970 ntBASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
CCDC68Q9H2F9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 AC011477.6-201ENST00000604980 1927 ntBASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CCDC68Q9H2F9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 HLA-H-201ENST00000383620 1096 ntBASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 AC142381.1-201ENST00000426099 345 ntBASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 GPX1P2-201ENST00000429271 606 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms