Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FOXP3Q9BZS1 LINC01101-201ENST00000622953 1884 ntBASIC16.46■□□□□ 0.22
FOXP3Q9BZS1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FOXP3Q9BZS1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 FAM8A3P-201ENST00000427218 844 ntBASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 AC011467.4-201ENST00000594891 528 ntBASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 AC092364.2-202ENST00000597012 1073 ntBASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 AC022145.2-201ENST00000598203 171 ntBASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 AL009183.1-201ENST00000603760 355 ntBASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 AC093512.1-201ENST00000617969 520 ntBASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXP3Q9BZS1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AC092474.2-201ENST00000424288 719 ntBASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 TIMM8BP1-201ENST00000452384 211 ntBASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AC112191.1-201ENST00000523689 701 ntBASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 AP003680.1-201ENST00000598970 3660 ntBASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 856.1 ms