Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF25Q93038 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF25Q93038 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF25Q93038 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF25Q93038 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF25Q93038 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF25Q93038 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF25Q93038 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 UGT1A2P-201ENST00000454886 866 ntBASIC17.94■□□□□ 0.46
TNFRSF25Q93038 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 AC015910.1-201ENST00000579400 975 ntBASIC17.94■□□□□ 0.46
TNFRSF25Q93038 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF25Q93038 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 KRT8P44-201ENST00000441609 1350 ntBASIC17.93■□□□□ 0.46
TNFRSF25Q93038 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AC084364.1-201ENST00000551967 1556 ntBASIC17.93■□□□□ 0.46
TNFRSF25Q93038 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AC093214.1-201ENST00000511688 1107 ntBASIC17.93■□□□□ 0.46
TNFRSF25Q93038 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 AL109954.1-202ENST00000564051 2148 ntBASIC17.93■□□□□ 0.46
TNFRSF25Q93038 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF25Q93038 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 FAM8A3P-201ENST00000427218 844 ntBASIC17.92■□□□□ 0.46
TNFRSF25Q93038 BASP1P1-201ENST00000430708 665 ntBASIC17.92■□□□□ 0.46
TNFRSF25Q93038 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 HYMAI-201ENST00000635591 3347 ntBASIC17.92■□□□□ 0.46
TNFRSF25Q93038 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF25Q93038 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms