Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC4Q8N9L1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 FAM8A3P-201ENST00000427218 844 ntBASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 AC105250.1-201ENST00000509378 2057 ntBASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC4Q8N9L1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AC135586.1-201ENST00000539323 574 ntBASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 SPCS2P1-201ENST00000561636 679 ntBASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AL096865.1-201ENST00000606796 927 ntBASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 AC127383.1-201ENST00000444697 1800 ntBASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms