Protein–RNA interactions for Protein: Q8N752

CSNK1A1L, Casein kinase I isoform alpha-like, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1LQ8N752 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 AC008894.3-201ENST00000624324 3103 ntBASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1LQ8N752 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 TIMM17BP1-201ENST00000545713 516 ntBASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 AC004233.3-201ENST00000607794 1269 ntBASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1LQ8N752 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 DOC2GP-202ENST00000514950 1163 ntBASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 AC097359.3-201ENST00000603982 1210 ntBASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 LINC01115-203ENST00000606068 577 ntBASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1A1LQ8N752 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms