Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LPCAT4Q643R3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LPCAT4Q643R3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LPCAT4Q643R3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.05■□□□□ -0
LPCAT4Q643R3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LPCAT4Q643R3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.05■□□□□ -0
LPCAT4Q643R3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LPCAT4Q643R3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LPCAT4Q643R3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LPCAT4Q643R3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 AC079776.2-201ENST00000641154 1609 ntBASIC15.04■□□□□ -0
LPCAT4Q643R3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.04■□□□□ -0
LPCAT4Q643R3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 RCN1P2-201ENST00000398357 915 ntBASIC15.04■□□□□ -0
LPCAT4Q643R3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.04■□□□□ -0
LPCAT4Q643R3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.04■□□□□ -0
LPCAT4Q643R3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.04■□□□□ -0
LPCAT4Q643R3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.04■□□□□ -0
LPCAT4Q643R3 AC010331.1-201ENST00000611423 582 ntBASIC15.04■□□□□ -0
LPCAT4Q643R3 AP001350.2-201ENST00000625104 1094 ntBASIC15.04■□□□□ -0
LPCAT4Q643R3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LPCAT4Q643R3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LPCAT4Q643R3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LPCAT4Q643R3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.03■□□□□ -0
LPCAT4Q643R3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LPCAT4Q643R3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.03■□□□□ -0
LPCAT4Q643R3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.03■□□□□ -0
LPCAT4Q643R3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.03■□□□□ -0
LPCAT4Q643R3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LPCAT4Q643R3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.03■□□□□ -0
LPCAT4Q643R3 VENTXP7-201ENST00000475503 772 ntBASIC15.03■□□□□ -0
LPCAT4Q643R3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.03■□□□□ -0
LPCAT4Q643R3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.03■□□□□ -0
LPCAT4Q643R3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.03■□□□□ -0
LPCAT4Q643R3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.03■□□□□ -0
LPCAT4Q643R3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.03■□□□□ -0
LPCAT4Q643R3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.03■□□□□ -0
LPCAT4Q643R3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.03■□□□□ -0
LPCAT4Q643R3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.03■□□□□ -0
LPCAT4Q643R3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms