Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 CYP4F24P-201ENST00000586049 1580 ntBASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 SPDYE7P-202ENST00000420373 878 ntBASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 AC105021.1-202ENST00000570572 669 ntBASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 MIR4453-201ENST00000584019 89 ntBASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC4Q5GLZ8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 KRT17P7-201ENST00000451704 1104 ntBASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 AC097493.3-201ENST00000509725 367 ntBASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 AL606495.2-201ENST00000605867 535 ntBASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 MIR6080-201ENST00000617359 66 ntBASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 CU639417.3-201ENST00000624240 1404 ntBASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC4Q5GLZ8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HERC4Q5GLZ8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms