Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.33■□□□□ 0.2
ALFQ53S48 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.33■□□□□ 0.2
ALFQ53S48 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.33■□□□□ 0.2
ALFQ53S48 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.33■□□□□ 0.2
ALFQ53S48 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.33■□□□□ 0.2
ALFQ53S48 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ALFQ53S48 MIR4313-201ENST00000580760 101 ntBASIC16.33■□□□□ 0.2
ALFQ53S48 LINC02560-201ENST00000596379 459 ntBASIC16.33■□□□□ 0.2
ALFQ53S48 LINC01115-203ENST00000606068 577 ntBASIC16.33■□□□□ 0.2
ALFQ53S48 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.2
ALFQ53S48 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ALFQ53S48 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 BTBD7P1-201ENST00000447253 1453 ntBASIC16.33■□□□□ 0.2
ALFQ53S48 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.33■□□□□ 0.2
ALFQ53S48 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.33■□□□□ 0.2
ALFQ53S48 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.33■□□□□ 0.2
ALFQ53S48 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ALFQ53S48 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.33■□□□□ 0.2
ALFQ53S48 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALFQ53S48 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.33■□□□□ 0.2
ALFQ53S48 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.33■□□□□ 0.2
ALFQ53S48 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.32■□□□□ 0.2
ALFQ53S48 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
ALFQ53S48 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ALFQ53S48 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
ALFQ53S48 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.32■□□□□ 0.2
ALFQ53S48 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.32■□□□□ 0.2
ALFQ53S48 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 AL589987.1-201ENST00000453380 819 ntBASIC16.32■□□□□ 0.2
ALFQ53S48 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ALFQ53S48 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.32■□□□□ 0.2
ALFQ53S48 AC104794.3-201ENST00000566840 1248 ntBASIC16.32■□□□□ 0.2
ALFQ53S48 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.32■□□□□ 0.2
ALFQ53S48 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ALFQ53S48 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.32■□□□□ 0.2
ALFQ53S48 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 AC074044.1-201ENST00000609673 707 ntBASIC16.32■□□□□ 0.2
ALFQ53S48 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.32■□□□□ 0.2
ALFQ53S48 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.32■□□□□ 0.2
ALFQ53S48 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.32■□□□□ 0.2
ALFQ53S48 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.32■□□□□ 0.2
ALFQ53S48 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALFQ53S48 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.32■□□□□ 0.2
ALFQ53S48 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.31■□□□□ 0.2
ALFQ53S48 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.31■□□□□ 0.2
ALFQ53S48 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
ALFQ53S48 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALFQ53S48 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.31■□□□□ 0.2
ALFQ53S48 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.31■□□□□ 0.2
ALFQ53S48 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ALFQ53S48 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.31■□□□□ 0.2
ALFQ53S48 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.31■□□□□ 0.2
ALFQ53S48 AC008761.3-201ENST00000624803 892 ntBASIC16.31■□□□□ 0.2
ALFQ53S48 AF228730.6-201ENST00000641497 218 ntBASIC16.31■□□□□ 0.2
ALFQ53S48 AC084121.3-201ENST00000641716 218 ntBASIC16.31■□□□□ 0.2
ALFQ53S48 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms