Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KHDC1Q4VXA5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 RARRES2P9-201ENST00000565168 469 ntBASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 AC006449.6-201ENST00000612330 2296 ntBASIC16.15■□□□□ 0.18
KHDC1Q4VXA5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
KHDC1Q4VXA5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
KHDC1Q4VXA5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
KHDC1Q4VXA5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
KHDC1Q4VXA5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
KHDC1Q4VXA5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
KHDC1Q4VXA5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 CICP24-201ENST00000605464 2705 ntBASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 AP001059.3-201ENST00000619053 235 ntBASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.14■□□□□ 0.17
KHDC1Q4VXA5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms