Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL139424.1-201ENST00000607572 797 ntBASIC14.26□□□□□ -0.13
SCN1BQ07699 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.26□□□□□ -0.13
SCN1BQ07699 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN1BQ07699 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 PI4KAP1-204ENST00000612579 1703 ntBASIC14.26□□□□□ -0.13
SCN1BQ07699 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.25□□□□□ -0.13
SCN1BQ07699 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.25□□□□□ -0.13
SCN1BQ07699 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.25□□□□□ -0.13
SCN1BQ07699 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.25□□□□□ -0.13
SCN1BQ07699 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.25□□□□□ -0.13
SCN1BQ07699 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.25□□□□□ -0.13
SCN1BQ07699 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.25□□□□□ -0.13
SCN1BQ07699 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 PGM5P2-202ENST00000637225 1043 ntBASIC14.25□□□□□ -0.13
SCN1BQ07699 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.25□□□□□ -0.13
SCN1BQ07699 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.25□□□□□ -0.13
SCN1BQ07699 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 MROH4P-201ENST00000431302 1578 ntBASIC14.25□□□□□ -0.13
SCN1BQ07699 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SCN1BQ07699 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN1BQ07699 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN1BQ07699 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.24□□□□□ -0.13
SCN1BQ07699 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SCN1BQ07699 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 AC041040.2-201ENST00000622926 2899 ntBASIC14.24□□□□□ -0.13
SCN1BQ07699 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCN1BQ07699 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.24□□□□□ -0.13
SCN1BQ07699 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.24□□□□□ -0.13
SCN1BQ07699 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms