Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AC104692.2-201ENST00000603054 253 ntBASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AC010507.1-201ENST00000633895 436 ntBASIC12.27□□□□□ -0.45
HIST1H1AQ02539 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 AC005089.1-201ENST00000619486 2241 ntBASIC12.27□□□□□ -0.45
HIST1H1AQ02539 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H1AQ02539 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 AC013268.4-201ENST00000637413 2228 ntBASIC12.26□□□□□ -0.45
HIST1H1AQ02539 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 AC069224.1-201ENST00000566372 1715 ntBASIC12.26□□□□□ -0.45
HIST1H1AQ02539 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 IGLL3P-201ENST00000412472 434 ntBASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TPM4P1-201ENST00000436100 807 ntBASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 MIR3909-201ENST00000579518 119 ntBASIC12.26□□□□□ -0.45
HIST1H1AQ02539 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 AC007064.4-201ENST00000637740 555 ntBASIC12.26□□□□□ -0.45
HIST1H1AQ02539 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1AQ02539 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.25□□□□□ -0.45
HIST1H1AQ02539 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 HCG4B-203ENST00000450128 991 ntBASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AC096734.2-201ENST00000562054 433 ntBASIC12.25□□□□□ -0.45
HIST1H1AQ02539 AC023141.13-201ENST00000604991 943 ntBASIC12.25□□□□□ -0.45
HIST1H1AQ02539 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1AQ02539 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms