Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 SPDYE7P-202ENST00000420373 878 ntBASIC13.9□□□□□ -0.18
HIST1H3AP68431 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 AC004967.1-201ENST00000453589 447 ntBASIC13.9□□□□□ -0.18
HIST1H3AP68431 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 AC027612.4-201ENST00000605371 583 ntBASIC13.9□□□□□ -0.18
HIST1H3AP68431 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 KRT8P12-202ENST00000472924 1397 ntBASIC13.9□□□□□ -0.18
HIST1H3AP68431 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H3AP68431 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H3AP68431 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.9□□□□□ -0.19
HIST1H3AP68431 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HIST1H3AP68431 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 PPT1-215ENST00000641471 2368 ntBASIC13.89□□□□□ -0.19
HIST1H3AP68431 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 HLA-J-203ENST00000494367 1087 ntBASIC13.89□□□□□ -0.19
HIST1H3AP68431 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 MIR4453-201ENST00000584019 89 ntBASIC13.89□□□□□ -0.19
HIST1H3AP68431 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 LINC00554-201ENST00000564841 3011 ntBASIC13.89□□□□□ -0.19
HIST1H3AP68431 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H3AP68431 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms