Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SRP9P49458 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 RNU1-129P-201ENST00000384064 167 ntBASIC14.19□□□□□ -0.14
SRP9P49458 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 AC002056.1-201ENST00000395613 760 ntBASIC14.19□□□□□ -0.14
SRP9P49458 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 AC140658.5-201ENST00000438532 169 ntBASIC14.19□□□□□ -0.14
SRP9P49458 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.19□□□□□ -0.14
SRP9P49458 AC112191.1-201ENST00000523689 701 ntBASIC14.19□□□□□ -0.14
SRP9P49458 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 U1.21-201ENST00000580816 167 ntBASIC14.19□□□□□ -0.14
SRP9P49458 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 AC021097.1-201ENST00000607902 574 ntBASIC14.19□□□□□ -0.14
SRP9P49458 AC092865.6-201ENST00000642101 219 ntBASIC14.19□□□□□ -0.14
SRP9P49458 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.19□□□□□ -0.14
SRP9P49458 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SRP9P49458 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.19□□□□□ -0.14
SRP9P49458 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.19□□□□□ -0.14
SRP9P49458 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 AC005089.1-201ENST00000619486 2241 ntBASIC14.18□□□□□ -0.14
SRP9P49458 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
SRP9P49458 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 MCCD1P2-201ENST00000423228 335 ntBASIC14.18□□□□□ -0.14
SRP9P49458 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 MIR3687-2-201ENST00000577708 61 ntBASIC14.18□□□□□ -0.14
SRP9P49458 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
SRP9P49458 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 MIR3687-1-201ENST00000614492 61 ntBASIC14.18□□□□□ -0.14
SRP9P49458 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SRP9P49458 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SRP9P49458 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 AC007686.3-201ENST00000619017 3487 ntBASIC14.18□□□□□ -0.14
SRP9P49458 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRP9P49458 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.18□□□□□ -0.14
SRP9P49458 TMBIM7P-203ENST00000641617 1718 ntBASIC14.18□□□□□ -0.14
SRP9P49458 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.18□□□□□ -0.14
SRP9P49458 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms