Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CENPAP49450 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.52□□□□□ -0.09
CENPAP49450 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.52□□□□□ -0.09
CENPAP49450 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.52□□□□□ -0.09
CENPAP49450 RNA5SP419-201ENST00000515908 135 ntBASIC14.52□□□□□ -0.09
CENPAP49450 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.52□□□□□ -0.09
CENPAP49450 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.52□□□□□ -0.09
CENPAP49450 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.52□□□□□ -0.09
CENPAP49450 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.52□□□□□ -0.09
CENPAP49450 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.52□□□□□ -0.09
CENPAP49450 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.52□□□□□ -0.09
CENPAP49450 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.52□□□□□ -0.09
CENPAP49450 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.52□□□□□ -0.09
CENPAP49450 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 AC016027.1-202ENST00000607927 1699 ntBASIC14.52□□□□□ -0.09
CENPAP49450 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.52□□□□□ -0.09
CENPAP49450 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CENPAP49450 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 HAUS4P1-201ENST00000406739 1145 ntBASIC14.51□□□□□ -0.09
CENPAP49450 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 RHOQP3-201ENST00000437982 621 ntBASIC14.51□□□□□ -0.09
CENPAP49450 AC093724.1-201ENST00000448659 1027 ntBASIC14.51□□□□□ -0.09
CENPAP49450 RPL13AP23-201ENST00000480739 586 ntBASIC14.51□□□□□ -0.09
CENPAP49450 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.51□□□□□ -0.09
CENPAP49450 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.51□□□□□ -0.09
CENPAP49450 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.51□□□□□ -0.09
CENPAP49450 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.51□□□□□ -0.09
CENPAP49450 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.51□□□□□ -0.09
CENPAP49450 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.51□□□□□ -0.09
CENPAP49450 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.51□□□□□ -0.09
CENPAP49450 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CENPAP49450 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CENPAP49450 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms